BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014E07SP1|AL426700
(734 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1645 1362 0.0
>3x_Contig1645
Length = 12736
Score = 1362 bits (684), Expect = 0.0
Identities = 721/733 (98%), Gaps = 4/733 (0%)
Strand = Plus / Plus
Query: 5 aaaaccgcttcaccatttaagattgataaaaacaaaattgttagagtgagttaacattta 64
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 8835 aaaaccgcttcaccatttaagattgataaaaacaaaattgttagagtgagtaaacattta 8894
Query: 65 acttcagtaaaagataaattggttaggatatacggcgagaacaaggataaattgttggg- 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8895 acttcagtaaaagataaattggttaggatatacggcgagaacaaggataaattgttgggg 8954
Query: 124 -tttagcaatacagaaagaaatgtttgaaactgctgttttcgacttcaaggaatcccaac 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8955 gtttagcaatacagaaagaaatgtttgaaactgctgttttcgacttcaaggaatcccaac 9014
Query: 183 tcgtggaatttcaactcccgtttcaagatat-tacctccacaattaaattcggagatttt 241
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 9015 tcgtggaatttcaactcccgtttcaagatatatacctccacaattaaattcggagatttt 9074
Query: 242 agtgtcgttagtatctcacgtaatgagctggacgaaattgtaccattaaacaatgaagaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9075 agtgtcgttagtatctcacgtaatgagctggacgaaattgtaccattaaacaatgaagaa 9134
Query: 302 atagaatttgacattgggaagaaccattttgcmacagttgccaatgaagcagtcgagctt 361
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 9135 atagaatttgacattgggaagaaccattttgcaacagttgcaaatgaagcagtcgagctt 9194
Query: 362 ccggtgttcaactttggtacacggcatggttttgtattthatgctggaggttttgtttca 421
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 9195 ccggtgttcaactttggtacacggcatggttttgtatttaatgctggaggttttgtttca 9254
Query: 422 gattcggcttggaccaaaattccagattcagataagcmatatcttgccatttcagtctca 481
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 9255 gattcggcttggaccaaaattccagattcagataagcaatatcttgccatttcagtctca 9314
Query: 482 agcgatcmagatgctgcggatcctgatttgagattatcaggaaaaccagtaccacatccg 541
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9315 agcgatcaagatgctgcggatcctgatttgagattatcaggaaaaccagtaccacatccg 9374
Query: 542 gcactactgamaatatacgaacttaatatagttaaagggacaatatcattattctaccag 601
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9375 gcactactgaaaatatacgaacttaatatagttaaagggacaatatcattattctaccag 9434
Query: 602 cttgcgcctgattttggagtttcttgggatcttaaatggcaccctggattcagtagtaac 661
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9435 -ttgcgcatgattttggagtttcttgggatcttaaatggcaccctggattcagtagtaac 9493
Query: 662 tcaacacatattggcgttttgactggtgttttccaagatggcactataaaatttttgcca 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9494 tcaacacatattggcgttttgactggtgttttccaagatggcactataaaatttttgcca 9553
Query: 722 attgaaaagagct 734
|||||||||||||
Sbjct: 9554 attgaaaagagct 9566
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5788
Number of Sequences: 1807
Number of extensions: 5788
Number of successful extensions: 138
Number of sequences better than 1.0e-20: 1
length of query: 734
length of database: 10,358,551
effective HSP length: 16
effective length of query: 718
effective length of database: 10,329,639
effective search space: 7416680802
effective search space used: 7416680802
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)